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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923700.1_cds_XP_016472236.1_64490
CDS Infomation

[gene=LOC107794273] [db_xref=GeneID:107794273] [protein=lignin-forming anionic peroxidase] [protein_id=XP_016472236.1] [location=join(22214..22435,22539..22730,23335..23500,23790..24178)] [gbkey=CDS]
Sequence

ATGAATACTCCAACTCAATCTTTCGCAGCTAAGGCTGCTATATTTTCTCTTCTTCTGCTT
TCATGCATGCAATGCCATGCACAACTTTCCGCGACGTTCTATGATAATACTTGCCCTAAT
GCACTCAACACGATTCGTACCAGCGTCAGGCAAGCTATTTCAAGTGAACGTCGCATGGCT
GCTTCGCTCATTCGCCTTCACTTTCATGACTGCTTTGTTCAGGGCTGTGATGCTTCGATC
TTACTTGATGAGACTCCTTCAATCGAAAGTGAGAAGACTGCGTTGCCAAATCTTGGGTCA
GCAAGAGGTTTTGGAATCATAGAAGATGCAAAGAGAGAGGTGGAAAAGATTTGTCCCGGG
GTGGTTTCATGTGCTGACATCCTAACTGTTGCAGCTCGCGATGCATCAGCTGCTGTAGGG
GGTCCATCATGGACAGTGAAACTCGGAAGAAGAGATTCAACAACTGCAAGTAAGACACTT
GCTGAAACTGATCTCCCCGGTCCTTTTGATCCTCTTAATAGGCTTATTTCTAGCTTTGCA
AGCAAAGGACTTAGCACAAGAGATATGGTCGCTTTGTCAGGGGCTCACACAATAGGCCAA
GCACAATGTTTCCTTTTTCGTGATCGGATTTATAGCAATGGAACAGACATTGATGCTGGA
TTTGCAAGCACTAGAAGACGTCAATGTCCTCAAGAAGGAGAGAATGGAAATCTAGCACCA
CTTGATTTGGTTACACCAAATCAATTCGATAACAATTACTTCAAAAATCTCATCCAAAAG
AAAGGTCTTCTTCAATCAGATCAAGTTCTTTTCAATGGAGGATCAACAGACAATATTGTT
TCTGAATATAGTAACAGTGCTCGAGCTTTCTCGTCAGACTTTGCTGCTGCTATGATCAAA
ATGGGAGATATTAGTCCCCTAAGTGGTCAAAATGGGATCATAAGAAAAGTTTGTGGCAGT
GTCAACTAG

Peptide Sequence

PEP ID

XP_016472236.1
PEP Infomation

PREDICTED: lignin-forming anionic peroxidase [Nicotiana tabacum]
Sequence

MNTPTQSFAAKAAIFSLLLLSCMQCHAQLSATFYDNTCPNALNTIRTSVRQAISSERRMA
ASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPG
VVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFA
SKGLSTRDMVALSGAHTIGQAQCFLFRDRIYSNGTDIDAGFASTRRRQCPQEGENGNLAP
LDLVTPNQFDNNYFKNLIQKKGLLQSDQVLFNGGSTDNIVSEYSNSARAFSSDFAAAMIK
MGDISPLSGQNGIIRKVCGSVN

Transcript Sequence

Gene sequence data has not been registered.